Largest molecular wheel ever made pushes limits of aromaticity rules

Largest molecular wheel ever made pushes limits of aromaticity rules :- 

 Published:- Royal Society of Chemistry      
BY MICHAEL GROSS,  22 JANUARY 2020


Source:- Royal Society of Chemistry (RSC) 
Reference:- Global Aromaticity at the Nanoscale; Nature Chemistry (2020)
Source:- Chemistry World 

Giant Aromatic Ring

Hückel’s rule, it is developed for the explanation of the properties of the six aromatic electrons in benzene, and it is still valid for a giant aromatic ring with 162 π electrons that is many times the size of the simplest aromatic. 
    
    E. Hückel developed his quantum theory of molecular orbitals in 1931. One consequence of his calculations was that rings with alternating single and double bonds and 4n+2 π electrons should be aromatic like benzene. Later work described those with a number divisible by four, like cyclobutadiene, as anti-aromatic. 
     
     In chemical terms, the aromatic rings are strongly stabilised, while the anti-aromatics are destabilised and it is less commonly encountered. A physical measure to check if a molecule is one or the other is the ring current induced when the molecule is exposed to a magnetic field such as during nuclear magnetic resonance spectroscopy. In aromatics, the current will oppose the external magnetic field within the ring, while in the anti-aromatics it will coincide with it. 

Over the decades, there are many aromatic and anti-aromatic molecules have been synthesised, and all obeyed Hückel’s simple rule. Porphyrins, for instance, the macrocycles found in haemoglobin and chlorophyll, provide a natural example with 18 π electrons. It remained unclear, however, how large aromatic rings can get before Hückel’s rule collapses. 

      Three years ago, Harry Anderson’s group at the University of Oxford, UK, constructed the world’s largest aromatic ring with a total of 78 π electrons. The molecular wheel was made up of six porphyrin rings grouped around a benzene hub, with six spokes connecting to zinc ions complexed by the porphyrins 
Largest Molecular Wheel

    Wheel chemistry Now, the chemists have broken their own record with a giant aromatic wheel containing a grand total of 162 π electrons. Doubling the size of their previous record holder, they constructed the wheel’s rim out of 12 porphyrin rings, put two stacked benzene hubs in the middle and created 12 longer spokes. 

     They also combined two halves of the smaller wheel with four spokes each to form an elongated construct with eight porphyrins. All in all, the researchers produced eight different nanorings in various oxidation states, accounting for 24 different molecular species. In all cases where ring currents could be detected, they were in accordance with Hückel’s rule. ‘It is amazing that the simple Hückel 4n+2 rule predicts the aromaticity or anti-aromaticity of a molecule better than sophisticated density functional theory calculations,’ Anderson tells Chemistry World
   
      The porphyrin constructs readily accept or release electrons, which enabled the researchers to study aromatic and anti-aromatic states using the same molecular structure. The different redox states can be distinguished by NMR, even when they are present in the same solution. Thus the system provides a convenient switch and readout for its aromatic properties. The group added a further twist to the tale when they combined the large 12-porphyrin cycle with two smaller hub-and-spoke molecules. As they had hoped, the ring wrapped itself into a figure-of-eight to accommodate both hub complexes. As the two parts of the ring now run in opposite directions, theory had predicted that the ring currents cancel out – a phenomenon the group was now able to observe for the first time. ‘The size of our nanoring makes it possible to achieve the required geometry for current cancellation,’ Anderson explains. This allowed the researchers to use geometry and redox state as independent switches to manipulate the aromatic properties of nanorings. 


    Rainer Herges from the University of Kiel, Germany, praised the advance into the terra incognita between classical and quantised electromagnetic systems, commenting: ‘The first results are already unexpected and surprising. I am sure the exploration of the field will unravel further fascinating effects and applications such as quantum computing.’ Meanwhile, the upper limit of Hückel’s rule remains to be found. 
   
    
     Source :- Royal Society of Chemistry  

Reference:- M D Peeks, T D W Claridge and H L Anderson, Nature, 2017,  

 Reference:-  Nature Chemistry (2020) 






Hidden Computational Power Found in the Arms of Neurons

 Hidden Computational Power Found in the Arms of Neurons :- 


 The dendritic arms of the some human neurons can be perform logic operations that once seemed to require a whole neural networks.

Published:-
January 14, 2020 by Jordana Cepelewicz

Source:- Quanta Magazine 

Yiota Poirazi


Yiota Poirazi, is a computational neuroscientist at the Institute of Molecular Biology and Biotechnology in Greece, is one of the famous researchers who recognized that the signals measured in dendrites might mean that some neurons that are operated as a multi-layer information-processing network.



The information-processing capabilities of the brain are often reported to reside in the trillions of connections that are wire its neurons altogether. But over the past few decades, mounting research has quietly shifted some of the attention to individual neurons, which seems to shoulder much more computational responsibility than once seemed imaginable. 




 The recently in a long line of evidence comes from scientists’ and they  discover of a new types of electrical signal in the upper layers of the human cortex. The Laboratory and modeling studies have already been shown that tiny compartments in the dendritic arms of cortical neurons. And they can each perform complicated operations in the some mathematical logics. But now it seems that individual dendritic compartments can also  be perform a particular computation, “exclusive OR” it is a mathematical theorists that had previously categorized as unsolvable by single-neuron systems. 

The limitations on Dumb Neutrons:- 

In the year of  1940s and ’50s, there is a picture began to dominate neuroscience, and  that of the “dumb” neuron, is a simple integrator, that is a point in a network that merely summed up its inputs. Branched extensions of the cell, called dendrites, and they would receive thousands of signals from the neighboring neurons, some excitatory and some inhibitory. In the body of the neurons, all those signals would be weighted and tallied, and if the total exceeded some threshold, the neurons are fired is a series of electrical pulses and that is directed to the stimulation of the adjacent neurons. 


Original source:- Quanta Magazine 
Read full text :- Click here 



Packaging RNA drugs into extracellular vesicles

Packaging RNA drugs into extracellular vesicles 

 Monique A. J. van Eijndhoven, S. Rubina Baglio & D. Michiel Pegtel
 
Published:-      
     Nature Biomedical Engineering 
     14 January 2020 

Source:- Nature.com

At a glance:- 
  
YouTube, Blogger, Website
DNA structure - 3D
  Packaging RNA drugs into extracellular vesicles.   The therapeutic dose of small interfering RNA can be reduced by endogenously expressing and packaging the RNA into extracellular vesicles through its integration with the backbone of a highly enriched pre-microRNA.


 What do extracellular vesicles do?
   Extracellular vesicle are known to facilitate intercellular communication in diverse cellular processes such as immune responses and coagulation. 

 What is Exosomal RNA? 
  Exosomes are nano-sized extracellular vesicles, of endosomal origin. They are released by cells and found in many body fluids, including plasma. Exosomes contain proteins, microRNAs , and messenger RNAs  that can be transferred between cells. 


What is an intracellular vesicle? 
    Sometimes cells need to transport small amounts of materials, like specific molecules. And The process of surrounding small quantities of materials, either from outside the cell or from some organelle is called pinocytosis. The small sacs that carry such material are called vesicles.


Full Text read:- Click here 
Source:- Click here 






chemical reaction of Coca Cola and pool chlorine

 chemical reaction of Coca Cola and pool chlorine:- 

What Will Happens If You Mix Coca Cola and Pool Chlorine?         
Coca Cola & Pool Chlorine

 The little amount of phosphoric acid in the Coke sets off a chemical reaction with the calcium hypochlorite. and finally it producing poisonous chlorine gas and a spectacular little explosion. 
 What chemicals react in Mentos and Coke?  
      As the Mentos candy sinks in the bottle, the candy causes the production of more and more carbon dioxide bubbles, and the rising bubbles react with carbon dioxide that is still dissolved in the soda to cause more carbon dioxide to be freed and create even more bubbles, resulting in the eruption and energy released. 
Coca Cola

what is coca cola ? 
   Coca-Cola is the most popular and biggest-selling soft drink in history, as well as the best-known product in the world.
Why is the Coke bad for you? 
   However, the phosphoric acid in the beverage dulls the sweetness, enabling us to keep the drink down. the Blood sugar levels increase gradually within 20 minutes of drinking the Cola, explains Naik, causing a burst of insulin. The liver then turns the high amounts of sugar circulating our body into fat. the liver then turns the high amounts of sugar for circulating our body into fat. Within 40 minutes, the body has absorbed all of the caffeines from the Cola, causing a dilation of pupils and an increase in blood pressure. By this point, the adenosine receptors in the brain have been blocked, preventing fatigue.
Addition of Pool Chlorine
 Why is coca cola called Coke?    
The drink is called "Coca-Cola" because of the cocaine leaf and kola fruits that were used to add flavor. Dr. Pemberton's partner and bookkeeper, Frank Robinson, suggested the name "Coca-Cola" because he thought using the letter C twice would look better than if they used a K in the word "Cola". 
Bubbles eruption &
Energy released
 What is pool chlorine?    Chlorine is the chemical most often used to keep swimming pools and Jacuzzis free of bacteria that can be hazardous to humans. The chlorine solution you pour into the water breaks down into many different chemicals, including hypochlorous acid  and hypochlorite ion.
Swelled up & explosion 
 Is pool chlorine bad for you?   
 But the chlorine is also creates some side effects, such as red eyes, dry skin and hair, and a strong odor. Chlorine can also cause health issues such as increased risk of developing allergies or asthma in kids. But in  many cases  health club pools choose it  to go with chlorine in their water.





Reaction of sugar with sulfuric acid

  Reaction of Sugar with Concentrated Sulphuric Acid :- 

At a glance:-
When concentrated sulphuric acid reacts with sugar it acts as a dehydrating agent; removing water from the sugar. 

During Experiment

 C12H22O11 (sugar) + H2SO4 (sulfuric acid) → 12 C (carbon) + 11 H2O (water) + mixture of water and acid.

 It is an extremely exothermic reaction process . And it produce  high amount of heat. 


Which elements are produced when sulfuric acid is added to sugar?

       When Concentrated sulfuric acid is mixed with household sugar, which is attacked by the acid. The final products are carbon, water vapor, and sulfur dioxide gas. 


What do you observe when concentrated Sulphuric acid is added to sugar? 
  

 Concentrated sulphuric acid is a strong dehydrating agent and it pulls the sugar molecules apart leaving just black carbon which froths due to the heat and water produced. 


What happens when sugar is burned
     Sugar is made of carbon, hydrogen and oxygen atoms. When heated over a candle, these elements react with the fire to turn into a liquid. The heat causes the sugar's atoms to combine with the oxygen in the air, forming new groups of atoms. Energy is released in this chemical reaction in the form of smoke and black soot.



What happens when carbon reacts with Sulphuric acid? 
  Actually  sulfuric acid should be a Concentrated and heated solution, for this reason  Carbon reacts with sulfuric acid to produce carbon dioxide and sulfur dioxide gas along with water.



A brief history of human disease genetics

A brief history of human disease genetics 

Melina Claussnitzer, Judy H. Cho, Mark I. McCarthy ; 

  published 8 January, 2020
  Nature Article : Source 


Introduction :-

A primary goal of human genetics is to identify the DNA sequence variants that is influence the biomedical traits, particularly those related to the onset and progression of human disease.

Over the past 25 years, the progress in realizing this objective has been transformed by advances in the field of technology, foundational genomic resources and analytical tools, and by access to vast amounts of genotype and phenotype data. And the Genetic discoveries have been substantially improved our understanding of the mechanisms that are responsible for so many rare and common diseases and driven development of novel preventative and therapeutic strategies. And the Medical innovation will be increasingly focus on delivering care tailored to individual patterns of the genetic predisposition.

    Human Diseases by Genetic Variation:- 

For almost all the human diseases, individual susceptibility is, to some degree, influenced by the genetic variation. However, Consequently, the characterizing of the relations between the sequence of  variation and disease predisposition which are provides a powerful tool for the identifying processes of fundamental to disease pathogenesis and highlighting novel strategies for the prevention and treatment.


Rare Diseases & rare Variants:- 

Actually the Rare diseases, rare variants During the 1980s and 1990s, the efforts to map disease genes were focused on rare, monogenic and syndromic diseases and were mostly driven by the linkage analysis and fine mapping within the large number of multiplex pedigrees.

     Common Disease & Common Variants:-

The Efforts to apply the approach to the linkage analysis in multiplex pedigrees that had been  successful for the high-penetrance variants which are responsible for The Mendelian disease. A largely unsuccessful for common, later-onset traits with more complex multifactorial aetiologies, like asthma, diabetes and depression.


Source:- nature.com 
For full Text read:- Click here 




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